Research
PP2I

Platform of Proteomic Imaging and molecular Interactions (PP2I) / BioCampus

 
Contact : 
- Martine Pugnière (CR1) for SPR (technology Biacore-TM)
Tel: +33 (0)4 67 61 45 18 Fax +33 (0)4 67 61 37 87 ; mail: martine.pugniere@inserm.fr

- Christian Larroque (DR2) christian.larroque@inserm.fr for Mass Spectrometry (Applied Biosystem)
Contact and organization : http://www.ppm.cnrs.fr/
 
Members :
Martine Pugnière,  Christian Larroque
Corinne Henriquet  corinne.henriquet@inserm.fr , Nicole Bec  nicole.bec@valdorel.fnclcc.fr
 
Equipment :

SPR :  Bia3000 et T200

     Label-free surface plasmon resonance: Biacore 3000 and Biacore T200 (GE Healthcare)
 
      
            T200                                                                            Bia 3000                                         
 
Main applications of SPR

Understanding molecular mechanisms including kinetics, affinity, specificity and concentration & structure-function relationships
     • Define potential drug targets and diagnostic markers
     • Select and characterize biotherapeutic candidates
     • Select and optimize lead compounds during
       drug discovery 

 
 
 
Mass Spectrometry :
 
   High resolution mass spectrometry: 4800 (Applied Biosystem)
 
- MALDI TOF/TOF ABsciex  4800
 
- Nano LC Dionex 3000 and Nanospotter Probot
 
 
 
Main applications of Mass Spectrometry

Characterization and identification of proteins from liquid mixtures or 1D or 2D SDS-PAGES (ref 2, 5),
Evaluation of surface effects on affinity for molecules of biological interest (ref 3, 13, 14)
Imagery by mass spectrometry : detection in tissues of peptides and/ or molecules of low molecular weight (ref 6).
 

 

 

 

 

 

Bibliography :

 

2017

Bougherara H, Némati F, Nicolas A, Massonnet G, Pugnière M, Ngô C, Le Frère-Belda MA, Leary A, Alexandre J, Meseure D, Barret JM, Navarro-Teulon I, Pèlegrin A, Roman-Roman S, Prost JF, Donnadieu E, Decaudin D. The humanized anti-human AMHRII mAb 3C23K exerts an anti-tumor activity against human ovarian cancer through tumor-associated macrophages. Oncotarget. 2017 Oct 7;8(59):99950-99965. doi: 10.18632/oncotarget.21556. eCollection 2017 Nov 21.

 

Sallon C, Callebaut I, Boulay I, Fontaine J, Logeart-Avramoglou D, Henriquet C, Pugnière M, Cayla X, Monget P, Harichaux G, Labas V, Canepa S, Taragnat C. Thrombospondin-1 (TSP-1), a new bone morphogenetic protein-2 and -4 (BMP-2/4) antagonist identified in pituitary cells. J Biol Chem. 2017 Jul 26. pii: jbc.M116.736207. doi: 10.1074/jbc.M116.736207.

 

Bahri A, Martin M, Gergely C, Pugnière M, Chevalier-Lucia D, Marchesseau S. Atomic Force Microscopy Study of the Topography and Nanomechanics of Casein Micelles Captured by an Antibody. Langmuir. 2017 May 16;33(19):4720-4728. doi: 10.1021/acs.langmuir.7b00311. Epub 2017 May 8.

 

Estupina P, Fontayne A, Barret JM, Kersual N, Dubreuil O, Le Blay M, Pichard A, Jarlier M, Pugnière M, Chauvin M, Chardès T, Pouget JP, Deshayes E, Rossignol A, Abache T, de Romeuf C, Terrier A, Verhaeghe L, Gaucher C, Prost JF, Pèlegrin A, Navarro-Teulon I. The anti-tumor efficacy of 3C23K, a glyco-engineered humanized anti-MISRII antibody, in an ovarian cancer model is mainly mediated by engagement of immune effector cells. Oncotarget. 2017 Feb 24. doi: 10.18632/oncotarget.15715.

 

2016

Chavanieu A, Pugnière M. Developments in SPR Fragment Screening. Expert Opin Drug Discov. 2016 May;11(5):489-99. Epub 2016 Mar 21. 

 

Golay J , Choblet S ,  Iwaszkiewicz J,  Cérutti P,  Ozil A, Loisel S ,  Pugnière M,  Ubiali G, Zoete V, Michielin O,  Berthou C, Kadouche J,  Mach JP,  Duonor-Cérutti M. Design and validation of a novel generic platform for the production of tetravalent IgG1-like bispecific antibodies. J Immunol. 2016 Apr 1;196(7):3199-211. doi: 10.4049/jimmunol.1501592. Epub 2016 Feb 26.

 

Brachet, G; Respaud R, Arnoult C, Henriquet C, Dhommee C, Viaud-Massuard MC, Heuze-Vourc'h N, Joubert N, Pugniere M, Gouilleux-Gruart V. Increasing drug loading on an antibody drug conjugate modifies its binding to the human Neonatal Fc Receptor in vitro. Mol Pharm. 2016 Apr 4;13(4):1405-12.  Epub 2016 Mar 1.

 

2015

Chavanieu A, Pugnière M. Developments in SPR Fragment Screening. Expert Opin Drug Discov. 2016 May;11(5):489-99. Epub 2016 Mar 21. 

 

David Ternant, Christophe Arnoult, Martine Pugnière, Christine Dhommée, Daniel Drocourt, Eric Perouzel, Christophe Passot¶, Nadine Baroukh, Denis Mulleman, Gerard Tiraby, Hervé Watier, Gilles Paintaud, Valérie Gouilleux-Gruart. IgG1 allotypes influence the pharmacokinetics of therapeutic monoclonal antibodies through FcRn binding. J Immunol. 2016 Jan 15;196(2):607-13. doi: 10.4049/jimmunol.1501780. Epub 2015 Dec 18

 

Zineb Lakrif, Martine Pugnière, Corinne Henriquet, Anne di Tommaso, Isabelle Dimier-Poisson, Philippe Billiald, Matthieu Juste, and Nicolas Aubrey. On the interaction between protein L and scFv: Design, acquisition and optimization. MAbs. 2015 Dec 18:0.

 

Pihan E, Delgadillo RF, Tonkin ML, Pugnière M, Lebrun M, Boulanger MJ, Douguet. D. Computational and biophysical approaches to protein-protein interaction inhibition of Plasmodium falciparum AMA1/RON2 complex. J Comput Aided Mol Des. 2015 Jun;29(6):525-39. doi: 10.1007/s10822-015-9842-7. Epub 2015 Mar 31.

 

Bastid J, Regairaz A, Bonnefoy N, Déjou C, Giustiniani J, Laheurte C, Cochaud S, Laprevotte E, Funck-Brentano E, Hemon P, Gros L, Bec N, Larroque C, Alberici G, Bensussan A, Eliaou JF. Inhibition of CD39 enzymatic function at the surface of tumor cells alleviates their immunosuppressive activity. Cancer Immunol Res. 2015 Mar;3(3):254-65.  Epub 2014 Nov 17.

 

2013

Rouhana J, Hoh F, Estaran S, Henriquet C, Boublik Y, Kerkour A, Trouillard R, Martinez J, Pugnière M, Padilla A, Chavanieu A. Fragment-Based Identification of a Locus in the Sec7 Domain of Arno for the Design of Protein-Protein Interaction Inhibitors. J Med Chem. 2013 Oct 29.

 

Rouhana J, Padilla A, Estaran S, Bakari S, Delbecq S, Boublik Y, Chopineau J, Chavanieu A, Pugnière M. Kinetics of interaction between ADP-ribosylation factor-1 (Arf1) and the Sec7 domain of Arno guanine nucleotide exchange factor, modulation by allosteric factors, and the uncompetitive inhibitor brefeldin A. J Biol Chem. 2013 Feb 15;288(7):4659-72. doi: 10.1074/jbc.M112.391748. Epub 2012 Dec 19.

 

2011

Ayrolles-Torro A, Imberdis T, Torrent J, Toupet K, Baskakov IV, Poncet-Montange G, Gregoire C, Roquet-Baneres F, Lehmann S, Rognan D, Pugniere M, Verdier JM, Perrier V. 2011. Oligomeric-Induced Activity by Thienyl Pyrimidine Compounds Traps Prion Infectivity. J Neurosci 31: 14882-92

 

Tonkin ML, Roques M, Lamarque MH, Pugnière M, Douguet D, Crawford J, Lebrun M, Boulanger MJ. Host cell invasion by apicomplexan parasites: insights from the co-structure of AMA1 with a RON2 peptide. Science. 2011 Jul 22;333(6041):463-7.

 

Estephan E, Saab MB, Agarwal V,. Cuisinier JGH, Larroque C, and Gergely C. Peptides for the biofunctionalization of silicon for use in optical sensing with porous silicon microcavities Adv Funct Mater. J Neurosci. 2011 Oct 19;31(42):14882-14892.

 

2010

Schmitt P, Wilmes M, Pugnière M, Aumelas A, Bachère E, Sahl HG, Schneider T and Destoumieux-Garzón D. Insight into invertebrate defensin mechanism of action: oyster defensins inhibit peptidoglycan biosynthesis by binding to lipid II JBC 2010 in press (IP 5.4)

 

Rogowski K., van Dijk J., Magiera MM., BOSC C., Deloulme C., Bosson A., Peris L., Gold ND., Lacroix B., Grau MB., Bec N., Larroque C., Desagher S., Holzer M., Andrieux A., Moutin MJ and Janke C. (2010) "A family of protein deglutamylating enzymes associated with neurodegeneration" Cell; 143, 564-578 (IF 32.6)

 

Estephan E., Bajoni D., Saab MB., Cloitre T., Aulombard T., Larroque C., Andreani LC. Liscidini M., Malvezzi and Gergely C. (2010) Sensing by means of non linear optics with functionalized photonic crystals" Langmuir 26: 10373-9 (IF 4.3)

 

Rayne F, Debaisieux S, Yezid H, Lin YL, Mettling C, Konate K, Chazal N, Arold ST, Pugnière M, Sanchez F, Bonhoure A, Briant L, Loret E, Roy C, Beaumelle B. (2010) Phosphatidylinositol-(4,5)-bisphosphate enables efficient secretion of HIV-1 Tat by infected T-cells. EMBO J. 29(8):1348-62. PMID: 20224549 (IP 9.3)

 

Bonfils C, Bec N, Larroque C, Del Rio M, Gongora C, Pugnière M, Martineau P. (2010) Cyclophilin A as negative regulator of apoptosis by sequestering cytochrome c. Biochem Biophys Res Commun. 393(2):325-30. PMID: 20138823. (IP 2.7)

 

Bouslimani A, Bec N, Glueckmann M, Hirtz C, Larroque C. (2010) Matrix-assisted laser desorption/ionization imaging mass spectrometry of oxaliplatin derivatives in heated intraoperative chemotherapy (HIPEC)-like treated preclinical model kidney. Rapid Commun Mass Spectrom. 24(4):415-21. PubMed 20082287. (IP 2.8)

 

2009

Behar G, Chames P, Teulon I, Cornillon A, Alshoukr F, Roquet F, Pugnière M, Teillaud JL, Gruaz-Guyon A, Pèlegrin A, Baty D. (2009) Llama single-domain antibodies directed against nonconventional epitopes of tumor-associated carcinoembryonicantigen absent from nonspecific cross-reacting antigen. FEBS J. 276(14):3881-93. (IP 3.2)

 

Alvarez-Rueda N, Ladjemi MZ, Béhar G, Corgnac S, Pugnière M, Roquet F, Bascoul-Mollevi C, Baty D, Pèlegrin A, Navarro-Teulon I. (2009) A llama single domain anti-idiotypic antibody mimicking HER2 as a vaccine: Immunogenicity and efficacy. Vaccine. 27(35):4826-33. (IP 3.5)

 

Banères-Roquet F, Gualtieri M, Villain-Guillot P, Pugnière M, Leonetti JP. (2009) Use of a surface plasmon resonance method to investigate antibiotic and plasmaprotein interactions. Antimicrob Agents Chemother. 53(4):1528-31. (IP 4.8)

 

Gualtieri M, Banéres-Roquet F, Villain-Guillot P, Pugnière M, Leonetti JP. (2009) The antibiotics in the chemical space. Curr Med Chem. 16(3):390-3. Review. (IP 5.3)

 

Yang Y, Boze H, Chemardin P, Padilla A, Moulin G, Tassanakajon A, Pugnière M, Roquet F, Destoumieux-Garzón D, Gueguen Y, Bachère E, Aumelas A. (2009) NMR structure of rALF-Pm3, an anti-lipopolysaccharide factor from shrimp: model of the possible lipid A-binding site. Biopolymers. 91(3):207-20. (IP 2.4)

 

Alava T, Berthet-Duroure N, Ayela C, Pugnière M, Morel Y, Rameil P, Tauran Y, Trévisiol E, Nicu N. (2009) Parallel acoustic detection of biological warfare agents surrogates by means of piezoelectric immunochips. Sensors & Actuators: B. Chemical. 138(2)532-538. (IP 3.2)

 

Estephan E, Larroque C, Bec N, Martineau P, Cuisinier FJ, Cloitre T, Gergely C. (2009) Selection and mass spectrometry characterization of peptides targeting semiconductor surfaces. Biotechnol Bioeng. 104(6):1121-31. PMID: 19634182. (IP 3.6)

 

Estephan E., Larroque C., Cuisinier F. and Gergely C. (2008) "Tailoring GaN semiconductor surfaces with biomolecules" J. Phys. Chem., 112, 8799-8805 (IF: 4.5)

 


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